File indexing completed on 2024-04-28 03:42:52

 /*
     SPDX-FileCopyrightText: 2011 Akarsh Simha <akarshsimha@gmail.com>
 
     SPDX-License-Identifier: GPL-2.0-or-later
 */
 
 /*
  * NOTE: I modified nomadbinfiletester.c to do this -- Akarsh
  */
 
 /*
  * TODO: VERY UGLY CODE. Please fix it some day. Preferably now.  This
  * file was created from a modified C file, and needs to be recast
  * into the C++ way of writing stuff, i.e. with classes etc.
  */
 
 #include "nomadbinfile2mysql.h"
 #include "binfile.h"
 #include "angconversion.h"
 #include "MeshIterator.h"
 #include <iostream>
 #include <string.h>
 #include <stdio.h>
 
 using namespace std;
 
 NOMADStarDataWriter::NOMADStarDataWriter(FILE *f, int HTMLevel, MYSQL *link, char *_db_tbl)
 {
     m_MySQLLink = link;
     DataFile    = f;
     // Create a new shiny HTMesh
     m_Mesh = new HTMesh(HTMLevel, HTMLevel);
     strcpy(db_tbl, _db_tbl);
     m_HeaderRead = false;
 }
 
 NOMADStarDataWriter::~NOMADStarDataWriter()
 {
     delete m_Mesh;
 }
 
 void NOMADStarDataWriter::bswap_stardata(DeepStarData *stardata)
 {
     stardata->RA   = bswap_32(stardata->RA);
     stardata->Dec  = bswap_32(stardata->Dec);
     stardata->dRA  = bswap_16(stardata->dRA);
     stardata->dDec = bswap_16(stardata->dDec);
     stardata->B    = bswap_16(stardata->B);
     stardata->V    = bswap_16(stardata->V);
 }
 
 /**
  *@short Create the table
  */
 bool NOMADStarDataWriter::createTable()
 {
     // TODO: This is not working. Investigate.
     char create_query[2048];
     sprintf(create_query,
             "CREATE TABLE IF NOT EXISTS `%s` (`Trixel` int(32) NOT NULL COMMENT 'Trixel Number', `RA` double NOT NULL "
             "COMMENT 'RA Hours', `Dec` double NOT NULL COMMENT 'Declination Degrees', `dRA` double NOT NULL COMMENT "
             "'Proper Motion along RA', `dDec` double NOT NULL COMMENT 'Proper Motion along Dec', `PM` double NOT NULL "
             "COMMENT 'Proper Motion (magnitude)', `V` float NOT NULL COMMENT 'Visual Magnitude', `B` float NOT NULL "
             "COMMENT 'Blue Magnitude', `Mag` float NOT NULL COMMENT 'Magnitude for sorting', `UID` int(64) NOT NULL "
             "auto_increment COMMENT 'Unique ID', `Copies` tinyint(8) NOT NULL COMMENT 'Number of Copies of the star', "
             "PRIMARY KEY  (`UID`), UNIQUE KEY `UID` (`UID`), KEY `Trixel` (`Trixel`,`PM`,`Mag`)) ENGINE=MyISAM DEFAULT "
             "CHARSET=latin1 AUTO_INCREMENT=1",
             db_tbl);
 
     if (mysql_query(m_MySQLLink, create_query))
     {
         cerr << "ERROR: Table creation failed!" << endl;
         return false;
     }
     return true;
 }
 
 /**
  *@short Calculate the final destination RA and Dec of a star with the
  *given initial RA, Dec and proper motion rates after 'years' number
  *of years
  */
 void NOMADStarDataWriter::calculatePMCoords(double startRA, double startDec, double dRA, double dDec, double *endRA,
                                             double *endDec, float years)
 {
     // (Translated from Perl)
     double theta0 = hour2rad(startRA);
     double lat0   = deg2rad(startDec);
 
     double PMperyear = sqrt(dRA * dRA + dDec * dDec);
 
     double dir0 = (years > 0.0) ? atan2(dRA, dDec) : atan2(-dRA, -dDec); // If years < 0, we're precessing backwards
     double PM   = PMperyear * fabs(years);
 
     double dst = deg2rad(arcsec2deg(PM / 1000.0)); // Milliarcsecond -> radian
 
     double phi0 = M_PI / 2.0 - lat0;
 
     double lat1   = asin(sin(lat0) * cos(dst) + cos(lat0) * sin(dst) * cos(dir0)); // Cosine rule on a sphere
     double dtheta = atan2(sin(dir0) * sin(dst) * cos(lat0), cos(dst) - sin(lat0) * sin(lat1));
 
     *endRA  = rad2hour(theta0 + dtheta);
     *endDec = rad2deg(lat1);
 }
 
 /**
  *@short Do some calculations and insert the star data into the database
  */
 bool NOMADStarDataWriter::insertStarData(unsigned int trixel, const DeepStarData *const data)
 {
     char query[2048];
     float mag;
     float B, V, RA, Dec, dRA, dDec;
 
     // Rescale the data from the structure
     B    = ((double)data->B) / 1000.0;
     V    = ((double)data->V) / 1000.0;
     RA   = ((double)data->RA) / 1000000.0;
     Dec  = ((double)data->Dec) / 100000.0;
     dRA  = ((double)data->dRA) / 1000.0;
     dDec = ((double)data->dDec) / 1000.0;
 
     // Check if the supplied trixel is really the trixel in which the
     // star is in according to its RA and Dec. If that's not the case,
     // this star is a duplicate and must be ignored
     unsigned int originalTrixelID = m_Mesh->index(RA, Dec);
     if (trixel != originalTrixelID)
         return true; // Ignore this star.
 
     // Magnitude for sorting.
     if (V == 30.0 && B != 30.0)
     {
         mag = B - 1.6;
     }
     else
     {
         mag = V;
     }
 
     // Compute the proper motion
     double RA1, Dec1, RA2, Dec2;
     double PM; // Magnitude of the proper motion in milliarcseconds per year
 
     PM = sqrt(dRA * dRA + dDec * dDec);
 
     calculatePMCoords(RA, Dec, dRA, dDec, &RA1, &Dec1, PM_MILLENIA * -1000.);
     calculatePMCoords(RA, Dec, dRA, dDec, &RA2, &Dec2, PM_MILLENIA * 1000.);
 
     unsigned int TrixelList[900];
     int ntrixels = 0;
 
     double separation = sqrt(hour2deg(RA1 - RA2) * hour2deg(RA1 - RA2) +
                              (Dec1 - Dec2) * (Dec1 - Dec2)); // Separation in degrees // ugly.
     if (separation > 50.0 / 60.0)                            // 50 arcminutes
     {
         m_Mesh->intersect(RA1, Dec1, RA2, Dec2);
         MeshIterator trixels(m_Mesh);
         while (trixels.hasNext())
         {
             TrixelList[ntrixels] = trixels.next();
             ntrixels++;
         }
     }
     else
     {
         TrixelList[0] = originalTrixelID;
         ntrixels      = 1;
     }
 
     if (ntrixels == 0)
     {
         cerr << "Ntrixels is zero in trixel " << originalTrixelID;
         return false;
     }
 
     for (int i = 0; i < ntrixels; ++i)
     {
         sprintf(query,
                 "INSERT INTO `%s` (`Trixel`, `RA`, `Dec`, `dRA`, `dDec`, `B`, `V`, `mag`, `PM`, `Copies`) VALUES "
                 "(\'%d\', \'%lf\', \'%lf\', \'%lf\', \'%lf\', \'%lf\', \'%lf\', \'%lf\', \'%lf\', \'%u\')",
                 db_tbl, TrixelList[i], RA, Dec, dRA, dDec, B, V, mag, PM,
                 ((TrixelList[i] == originalTrixelID) ?
                      ntrixels :
                      0) // Duplicates get a 'Copies' value of 0. The real star gets the actual value.
         );
         if (mysql_query(m_MySQLLink, query))
         {
             cerr << "MySQL INSERT INTO failed! Query was: " << endl << query << endl;
             return false;
         }
     }
     return true;
 }
 
 bool NOMADStarDataWriter::truncateTable()
 {
     // Truncate table. TODO: Issue warning etc
     char query[60];
     sprintf(query, "TRUNCATE TABLE `%s`", db_tbl);
     if (mysql_query(m_MySQLLink, query))
     {
         cerr << "Truncate table query \"" << query << "\" failed!" << endl;
         return false;
     }
     return true;
 }
 
 /**
  *@short Write star data to the database
  */
 bool NOMADStarDataWriter::writeStarDataToDB()
 {
     int8_t HTM_Level;
     u_int16_t MSpT;
     u_int32_t nstars;
     u_int32_t offset;
     unsigned int trixel;
     DeepStarData data;
     int16_t mag;
 
     /*
       // TODO: FIX THIS // FIXME
     // We must at least check if the HTM level matches
     fseek( DataFile, m_IndexOffset - 3, SEEK_SET );
     fread( &HTM_Level, 1, 1, DataFile );
     fprintf( stdout, "HTMesh Level: %d\n", HTM_Level );
     if( HTM_Level != m_Mesh->level() ) {
         cerr << "ERROR: HTMesh Level in file (" << HTM_Level << ") and HTM_LEVEL in program (" << m_Mesh->level() << ") differ." << endl
              << "Please set the define directive for HTM_LEVEL in the header file correctly and rebuild."
              << endl;
         return false;
     }
     */
 
     for (trixel = 0; trixel < ntrixels; ++trixel)
     {
         fseek(DataFile, m_IndexOffset + trixel * INDEX_ENTRY_SIZE + 4, SEEK_SET);
         fread(&offset, 4, 1, DataFile);
         fread(&nstars, 4, 1, DataFile);
 
         /* If offset > 2^31 - 1, do the fseek in two steps */
         if (offset > (unsigned)(pow2(31) - 1))
         {
             fseek(DataFile, pow2(31) - 1, SEEK_SET);
             fseek(DataFile, offset - pow2(31) + 1, SEEK_CUR);
         }
         else
             fseek(DataFile, offset, SEEK_SET);
 
         for (int i = 0; i < nstars; ++i)
         {
             fread(&data, sizeof(DeepStarData), 1, DataFile);
             if (byteswap)
                 bswap_stardata(&data);
 
             /** CODE FROM INSERTSTARDATA PASTED HERE FOR SPEED */
             {
                 char query[2048];
                 float mag;
                 float B, V, RA, Dec, dRA, dDec;
 
                 // Rescale the data from the structure
                 B    = ((double)data.B) / 1000.0;
                 V    = ((double)data.V) / 1000.0;
                 RA   = ((double)data.RA) / 1000000.0;
                 Dec  = ((double)data.Dec) / 100000.0;
                 dRA  = ((double)data.dRA) / 1000.0;
                 dDec = ((double)data.dDec) / 1000.0;
 
                 // Check if the supplied trixel is really the trixel in which the
                 // star is in according to its RA and Dec. If that's not the case,
                 // this star is a duplicate and must be ignored
                 unsigned int originalTrixelID = m_Mesh->index(hour2deg(RA), Dec);
                 if (trixel != originalTrixelID)
                 {
                     cout << "Trixel = " << trixel << ", but this is the original Trixel ID: " << originalTrixelID
                          << ". Skipping" << endl;
                     cout << "Skipped star has (RA, Dec) = " << RA << Dec << "; (dRA, dDec) = " << dRA << dDec
                          << "; and (B, V) = " << B << V << "." << endl;
                     cout << "This suspected duplicate is star " << i << "in trixel " << trixel;
                     continue;
                 }
 
                 // Magnitude for sorting.
                 if (V == 30.0 && B != 30.0)
                 {
                     mag = B - 1.6;
                 }
                 else
                 {
                     mag = V;
                 }
 
                 // Compute the proper motion
                 double RA1, Dec1, RA2, Dec2, RA1deg, RA2deg;
                 double PM; // Magnitude of the proper motion in milliarcseconds per year
 
                 PM = sqrt(dRA * dRA + dDec * dDec);
 
                 calculatePMCoords(RA, Dec, dRA, dDec, &RA1, &Dec1, PM_MILLENIA * -1000.);
                 calculatePMCoords(RA, Dec, dRA, dDec, &RA2, &Dec2, PM_MILLENIA * 1000.);
                 RA1deg = hour2deg(RA1);
                 RA2deg = hour2deg(RA2);
 
                 unsigned int TrixelList[60];
                 int nt = 0;
 
                 double separationsqr = (RA1deg - RA2deg) * (RA1deg - RA2deg) +
                                        (Dec1 - Dec2) * (Dec1 - Dec2); // Separation in degrees // ugly.
                 if (separationsqr >
                     0.69) // 50 arcminutes converted to degrees, squared and rounded below = 0.69. (This has nothing to do with sex positions.)
                 {
                     m_Mesh->intersect(RA1deg, Dec1, RA2deg, Dec2);
                     MeshIterator trixels(m_Mesh);
                     while (trixels.hasNext())
                     {
                         TrixelList[nt] = trixels.next();
                         nt++;
                     }
                 }
                 else
                 {
                     TrixelList[0] = originalTrixelID;
                     nt            = 1;
                 }
 
                 if (nt == 0)
                 {
                     cerr << "# of trixels is zero in trixel " << originalTrixelID;
                     return false;
                 }
 
                 for (int i = 0; i < nt; ++i)
                 {
                     sprintf(query,
                             "INSERT INTO `%s` (`Trixel`, `RA`, `Dec`, `dRA`, `dDec`, `B`, `V`, `mag`, `PM`, `Copies`) "
                             "VALUES (\'%d\', \'%lf\', \'%lf\', \'%lf\', \'%lf\', \'%lf\', \'%lf\', \'%lf\', \'%lf\', "
                             "\'%u\')",
                             db_tbl, TrixelList[i], RA, Dec, dRA, dDec, B, V, mag, PM,
                             ((TrixelList[i] == originalTrixelID) ?
                                  nt :
                                  0) // Duplicates get a 'Copies' value of 0. The real star gets the actual value.
                     );
                     if (mysql_query(m_MySQLLink, query))
                     {
                         cerr << "MySQL INSERT INTO failed! Query was: " << endl << query << endl;
                         return false;
                     }
                 }
             }
         }
         if (trixel % 100 == 0)
             cout << "Finished trixel " << trixel << endl;
     }
 
     return true;
 }
 
 bool NOMADStarDataWriter::readFileHeader()
 {
     int i;
     int16_t endian_id;
     char ASCII_text[125];
     u_int8_t version_no;
     u_int16_t nfields;
 
     if (!DataFile)
         return false;
 
     fread(ASCII_text, 124, 1, DataFile);
     ASCII_text[124] = '\0';
     printf("%s", ASCII_text);
 
     fread(&endian_id, 2, 1, DataFile);
     if (endian_id != 0x4B53)
     {
         fprintf(stdout, "Byteswapping required\n");
         byteswap = 1;
     }
     else
     {
         fprintf(stdout, "Byteswapping not required\n");
         byteswap = 0;
     }
 
     fread(&version_no, 1, 1, DataFile);
     fprintf(stdout, "Version number: %d\n", version_no);
 
     fread(&nfields, 2, 1, DataFile);
 
     // Just to read those many bytes
     // TODO: Don't waste time and memory. fseek.
     dataElement de;
     for (i = 0; i < nfields; ++i)
         fread(&de, sizeof(struct dataElement), 1, DataFile);
 
     fread(&ntrixels, 4, 1, DataFile);
     if (byteswap)
         ntrixels = bswap_32(ntrixels);
     fprintf(stdout, "Number of trixels reported = %d\n", ntrixels);
 
     m_IndexOffset = ftell(DataFile);
 
     m_HeaderRead = true;
 
     return true;
 }
 
 bool NOMADStarDataWriter::write()
 {
     if (!readFileHeader())
         return false;
     if (!createTable())
         return false;
     truncateTable();
     if (!writeStarDataToDB())
         return false;
 }
 
 int main(int argc, char *argv[])
 {
     MYSQL link;
     FILE *f;
     char db_tbl[20];
     char db_name[20];
 
     if (argc <= 5)
     {
         fprintf(stderr, "USAGE: %s <NOMAD bin file> <MySQL DB User> <Password> <DB Name> <Table Name>\n", argv[0]);
         return 1;
     }
 
     strcpy(db_tbl, argv[5]);
     strcpy(db_name, argv[4]);
 
     f = fopen(argv[1], "r");
 
     if (f == nullptr)
     {
         fprintf(stderr, "ERROR: Could not open file %s for binary read.\n", argv[1]);
         return 1;
     }
 
     /* Open the Database */
     if (mysql_init(&link) == nullptr)
     {
         fprintf(stderr, "ERROR: Failed to initialize MySQL connection!\n");
         return 1;
     }
     MYSQL *ret;
     ret = mysql_real_connect(&link, "localhost", argv[2], argv[3], db_name, 0, nullptr, 0);
 
     if (!ret)
     {
         fprintf(stderr, "ERROR: MySQL connect failed for the following reason: %s\n", mysql_error(&link));
         fcloseall();
         return 1;
     }
 
     if (mysql_select_db(&link, db_name))
     {
         fprintf(stderr, "ERROR: Could not select MySQL database %s. MySQL said: %s", db_name, mysql_error(&link));
         fcloseall();
         mysql_close(&link);
         return 1;
     }
 
     NOMADStarDataWriter writer(f, HTM_LEVEL, &link, db_tbl);
 
     writer.write();
 
     fclose(f);
     mysql_close(&link);
     return 0;
 }